Difference between revisions of "Proposed template"
From HPC
(→Application Details) |
(→Interactive) |
||
| Line 37: | Line 37: | ||
>> | >> | ||
| + | </pre> | ||
| + | |||
| + | |||
| + | |||
| + | === Batch Submission === | ||
| + | <pre style="background-color: #C8C8C8; color: black; border: 2px solid blue; font-family: monospace, sans-serif;"> | ||
| + | #!/bin/bash | ||
| + | #SBATCH -J MATLAB # Job name, you can change it to whatever you want | ||
| + | #SBATCH -N 1 # Number of nodes (for Matlab should be always one) | ||
| + | #SBATCH -o %N.%j.out # Standard output will be written here | ||
| + | #SBATCH -e %N.%j.err # Standard error will be written here | ||
| + | #SBATCH -p compute # Slurm partition, where you want the job to be queued | ||
| + | #SBATCH -t 0-01:30 # Your expected run-time format in D-HH:MM | ||
| + | #SBATCH --exclusive | ||
| + | |||
| + | module purge | ||
| + | module add matlab/2016a | ||
| + | |||
| + | matlab -nodisplay -nojvm -nodesktop -nosplash -r my_matlab_m_file | ||
| + | </pre> | ||
| + | This submission script can be found at /path/to/sample/script | ||
| + | Matlab | ||
| + | |||
| + | <pre style="background-color: #C8C8C8; color: black; border: 2px solid black; font-family: monospace, sans-serif;"> | ||
| + | [username@login01 ~]$ sbatch MATLABtest.job | ||
| + | Submitted batch job 289522 | ||
</pre> | </pre> | ||
Revision as of 14:04, 2 February 2017
Application Details
- Description: Matlab is a numerical computing environment and programming language developed by MathWorks, MATLAB allows matrix manipulations, plotting of functions and data, and implementation of algorithms. A range of toolboxes (see list below) are available to extend functionality.
- Versions: 2016a, 2017a
- Module names: matlab/2016a, matlab/2017a
- License: University of Hull Total Academic Headcount license, available to everyone
- Forum support: https://www.hpc.hull.ac.uk/forum/viewforum.php?f=14
- Further information: https://www.mathworks.com/products/matlab.html
Template:Note : news, new versions, upcomming events and if something wrong.
Interactive
Interactive with full graphical interface:
[username@login01 ~]$ interactive salloc: Granted job allocation 289663 Job ID 289663 connecting to c170, please wait... Last login: Thu Jan 26 12:59:11 2017 from 10.254.5.246 [username@c170 ~]$ module add matlab/2016a [username@c170 ~]$ matlab
Interactive with command line only:
[username@c170 ~]$ matlab -nodisplay
< M A T L A B (R) >
Copyright 1984-2016 The MathWorks, Inc.
R2016a (9.0.0.341360) 64-bit (glnxa64)
February 11, 2016
To get started, type one of these: helpwin, helpdesk, or demo.
For product information, visit www.mathworks.com.
Academic License
>>
Batch Submission
#!/bin/bash #SBATCH -J MATLAB # Job name, you can change it to whatever you want #SBATCH -N 1 # Number of nodes (for Matlab should be always one) #SBATCH -o %N.%j.out # Standard output will be written here #SBATCH -e %N.%j.err # Standard error will be written here #SBATCH -p compute # Slurm partition, where you want the job to be queued #SBATCH -t 0-01:30 # Your expected run-time format in D-HH:MM #SBATCH --exclusive module purge module add matlab/2016a matlab -nodisplay -nojvm -nodesktop -nosplash -r my_matlab_m_file
This submission script can be found at /path/to/sample/script Matlab
[username@login01 ~]$ sbatch MATLABtest.job Submitted batch job 289522