Applications/Prinseq-lite

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Application Details

  • Description: PRINSEQ can be used to filter, reformat, or trim genomic and metagenomic sequence data.
  • Version: 0.20.4
  • Modules: prinseq-lite/0.20.4
  • Citing: If you use PRINSEQ, please cite: Schmieder R and Edwards R: Quality control and preprocessing of metagenomic datasets. Bioinformatics 2011, 27:863-864. [PMID: 21278185]

Usage Examples

Usage information can be found at http://prinseq.sourceforge.net/manual.html

Interactive Session


[username@login01 ~]$ interactive
salloc: Granted job allocation 3619683
Job ID 3619683 connecting to c025, please wait...
c025.vc-main

[username@login01 ~]$ module add prinseq-lite/0.20.4

Next Steps





Modules | Main Page | Further Topics