Applications/Avizo

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Application Details

  • Description: Avizo data visualisation and analysis tool
  • Versions: 9.0.1 and 9.2.0
  • Module names: avizo/9.0.1 avizo/9.2.0
  • License: Medical Engineering group license, restricted access. Please email viper@hull.ac.uk for information.

Modules

Avizo 9.0.1

Only AvizoLite is available for the Avizo 9.0.1 module, and Avizo is an alias to AvizoLite. This version of AvizoLite uses 1 license token, however any project that uses the Filter Sandbox, which is a full Avizo feature, will automatically load that capability and consume an additional 5 tokens.

Avizo 9.2.0

The AvizoLite version in the Avizo 9.2.0 module uses 3 license tokens. Any project that uses the Filter Sandbox, which is a full Avizo feature, will automatically load that capability and consume an additional 5 tokens.

Usage Examples

Pre-usage

To use Avizo, login to a Visualisation node and start a VNC or X2Go session and open a MATE terminal.

Before launching Avizo, please run the following command, which will set up your Avizo environment (this only needs to be run once):

[username@rvisu01 ~]$ module add avizo/9.2.0
[username@rvisu01 ~]$ setupAvizo.sh

Interactive

Please note it is best to use one of the visualisation nodes to run Avizo

[username@rvisu01 ~]$ module add avizo/9.2.0
[username@rvisu01 ~]$ vglwrapper Avizo

Further Information