Difference between revisions of "Applications/Fiji"
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==Usage Examples== | ==Usage Examples== | ||
| + | Fiji is an open source image processing program for multidimensional image data with a focus on scientific imaging. | ||
| − | + | It is a user interface with functions to load, display, and save images. It can be used for image processing, co-localization, deconvolution, registration, segmentation, tracking, visualization and much more. It extends the functionality of ImageJ. | |
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| − | [username@ | + | [username@rvisu01 ~]$ module add fiji/2017-03-2015 |
| + | [username@rvisu01 ~]$ fiji | ||
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| − | [username@ | + | [username@rvisu01 ~]$ module add fiji/imagej |
| + | [username@rvisu01 ~]$ fiji | ||
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* [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855844/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855844/] | * [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855844/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855844/] | ||
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Latest revision as of 10:44, 16 November 2022
Application Details
- Description: Fiji is an image processing package—a "batteries-included" distribution of ImageJ, bundling a lot of plugins which facilitate scientific image analysis.
- Version: ImageJ and 2017-03-15
- Modules: fiji/2017-03-15 and fiji/imagej
- Licence: Open source (Github)
Usage Examples
Fiji is an open source image processing program for multidimensional image data with a focus on scientific imaging.
It is a user interface with functions to load, display, and save images. It can be used for image processing, co-localization, deconvolution, registration, segmentation, tracking, visualization and much more. It extends the functionality of ImageJ.
[username@rvisu01 ~]$ module add fiji/2017-03-2015 [username@rvisu01 ~]$ fiji
[username@rvisu01 ~]$ module add fiji/imagej [username@rvisu01 ~]$ fiji