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=== Welcome to Viper Wiki ===
 
  
[[File:rot-dn.gif|frame|left]] <br/>
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
<strong>This area provides technical support to the users of Viper</strong>.
 
 
== Application Support ==
 
 
Click on the links below for support on the individual packages below:
 
  
 
{| class="wikitable"
 
{| class="wikitable"
| style="width:25%" | <Strong>Package</Strong>
+
| style="width:25%; background: #ecc;" | <Strong>Welcome to Viper Wiki </Strong>
| style="width:75%" | <Strong>Description</Strong>
+
| style="width:75%; background: #ecc;" |
|-
 
| [[applications/Ansys|Ansys]]
 
| ANSYS Fluent software includes broad physical modelling capabilities to model flow, turbulence, heat transfer, and reactions for industrial applications.
 
|-
 
| [[applications/Avizo|Avizo]]
 
| Avizo data visualisation and analysis tool
 
|-
 
| [[applications/Autotools|Autotools]]
 
| GNU Autotools, a suite of programming tools designed to assist in making source code packages
 
|-
 
| [[applications/COMSOL|COMSOL]]
 
| COMSOL Multiphysics is a general-purpose software platform, based on advanced numerical methods, for modeling and simulating physics-based problems
 
|-
 
| [[applications/CP2K|CP2K]]
 
| CP2K is a quantum chemistry and solid state physics software package that can perform atomistic simulations of solid state, liquid, molecular, periodic, material, crystal, and biological systems.
 
|-
 
| [[applications/Delft3D|Delft3D]]
 
| Delft3D is a world leading 3D modeling suite to investigate hydrodynamics, sediment transport and morphology and water quality for fluvial, estuarine and coastal environments.
 
|-
 
| [[applications/FDS-SMV|FDS-SMV]]
 
| Fire Dynamics Simulator (FDS) is a large-eddy simulation (LES) code for low-speed flows, with an emphasis on smoke and heat transport from fires. Smokeview (SMV) is a visualization program used to display the output of FDS and CFAST simulations.
 
|-
 
| [[applications/GCC|GCC]]
 
| GCC (GNU Compiler Collection) is a collection of compilers consisting of C, C++, Fortran and more.
 
|-
 
| [[applications/Gnuplot|GNUplot]]
 
| Gnuplot is a portable command-line driven graphing utility for Linux, OS/2, MS Windows, OSX, VMS, and many other platforms.
 
|-
 
|[[applications/IDL|IDL]]
 
|  IDL, short for Interactive Data Language, is a programming language used for data analysis. It is popular in particular areas of science, such as astronomy, atmospheric physics and medical imaging.
 
|-
 
|[[applications/LS-DYNA|LS-DYNA]]
 
|  General-purpose finite element program capable of simulating complex real world problems.
 
|-
 
| [[Applications/Matlab|Matlab]]
 
|  Numerical Computing Environment.
 
|-
 
| [[Applications/MrBayes|MrBayes]]
 
| MrBayes: Bayesian Inference of Phylogeny
 
|-
 
| [[applications/Nwchem|Nwchem]]
 
| NWChem provides computational chemistry tools  and particularly large scientific computational chemistry problems.
 
|-
 
|[[applications/Orca|Orca]]
 
| ORCA is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules.
 
|-
 
|[[applications/Perl|Perl]]
 
| Perl is a family of high-level, general-purpose, interpreted, dynamic programming languages.
 
|-
 
| [[applications/SAS|SAS]]
 
|  Statistical Analysis System.
 
|-
 
|  [[applications/Star-ccm+|Star-ccm+]]
 
|  Computational Fluid Package.
 
|-
 
| [[applications/Stata|Stata]]
 
| Stata is a commercial statistical package, which provides a complete solution for data analysis, data management, and graphics.
 
 
|-  
 
|-  
| [[applications/Utilities|Utilities]]
+
| [[File:newbanner.png|link=http://hpc.mediawiki.hull.ac.uk/General/What_is_Viper]]
| General utilities module including zip, wget and git utilities.
+
| <strong>This area provides technical support to the users of Viper</strong>
|-
 
|}
 
  
== General Support ==
+
* [[Applications|Applications]] installed on ''Viper''.
 
+
* [[Libraries|Libraries]] used with other programs.
Click on the links below for general support:
+
* [[Programming|Development]] to program your own codes, and run third-party code.
 
+
* [[General|General]] items, like connecting to ''Viper'', VPN and training materials.
{| class="wikitable"
+
<!--* [[ViperUpdate|Viper Update]] Information about the Viper updates.-->
| style="width:25%" | <Strong>Topic</Strong>
 
| style="width:75%" | <Strong>Description</Strong>
 
|-
 
| [[General/What_is_Viper|What is Viper]]
 
| What is Viper?
 
|-
 
| [[General/Batch|Batch Jobs]]
 
| Viper batch jobs guide
 
|-
 
| [[General/Interactive|Interactive Sessions]]
 
| Viper Interactive session guide
 
 
|-
 
|-
| [[General/Modules|Modules]]
+
|}  
| Application module guide
 
|-
 
| [[General/Slurm|Slurm]]
 
| Slurm how-to
 
|-
 
| [[General/Visualisation Nodes|Visualisation Nodes]]
 
| Guide to using Viper's visualisation nodes
 
|-
 
|}
 
 
 
== Training ==
 
  
 
{| class="wikitable"
 
{| class="wikitable"
| style="width:25%" | <Strong>Training Area</Strong>
+
| style="width:25%; background: #bbd;" | <Strong>Other Areas </Strong>
| style="width:75%" | <Strong>Description</Strong>
+
| style="width:75%; background: #bbd;" |
|-
+
|-  
| [[Training/Getting Connected|Getting Connected]]
+
|
| Learn how to connect to Viper
+
|
|-
+
* [http://hpc.mediawiki.hull.ac.uk/General/What_is_Viper Learn more about Viper?]
| [[Training/Transferring Data|Transferring Data]]
+
* [https://viper.hull.ac.uk/ Apply for an account (''campus only'')]
| Learn how to download and upload data.
 
|-
 
| [[Training/Working Remotely on Viper|Working Remotely on Viper]]
 
| Learn how to remotely connect to Viper.
 
|-
 
| [[Training/Linux - command line|Linux command line]]
 
| Learn the Linux command line with this extensive guide.
 
|-
 
| [[Training/Linux_-_vi_editor|Linux vi editor]]
 
| Learn the Linux editor vi for editing files
 
|-
 
| [[Training/Linux - Nano editor|Linux nano editor]]
 
| Learn the Linux editor nano for editing files
 
|-
 
| [[Training/Data_Backup|Data Backup]]
 
| Data backup for user accounts
 
|-
 
|}
 
 
 
== Programming Support ==
 
 
 
Click on the links below for support on programming packages:
 
 
 
{| class="wikitable"
 
| style="width:25%" | <Strong>Package</Strong>
 
| style="width:75%" | <Strong>Description</Strong>
 
|-
 
| [[programming/C|C]]
 
| C is a general-purpose, high-level language that was originally developed by Dennis M. Ritchie to develop the UNIX operating system at Bell Labs.
 
|-
 
| [[programming/C-Plusplus|C++]]
 
| C++ is a general-purpose programming language. It has imperative, object-oriented and generic programming features, while also providing facilities for low-level memory manipulation.
 
|-
 
| [[programming/C-Sharp|C-Sharp]]
 
| C# is a multi-paradigm programming language encompassing strong typing, imperative, declarative, functional, generic, object-oriented (class-based), and component-oriented programming. Originally created by Microsoft.
 
|-
 
| [[programming/Cuda|CUDA]]
 
| CUDA is a parallel computing platform and application programming interface (API) model created by Nvidia.
 
|-
 
| [[programming/Fortran|Fortran]]
 
| Fortran is a general-purpose, imperative programming language that is especially suited to numeric computation and scientific computing.
 
|-
 
| [[programming/Java|JAVA]]
 
| Java is a high-level programming language originally developed by Sun Microsystems and released in 1995.
 
|-
 
| [[programming/OpenMP|OpenMP]]
 
| OpenMP is an implementation of multithreading, a method of parallelizing whereby a master thread (a series of instructions executed consecutively) forks a specified number of slave threads and the system divides a task among them.  
 
|-
 
| [[programming/OpenMPI|OpenMPI]]
 
| MPI stands for the Message Passing Interface. MPI is a standardized API typically used for parallel and/or distributed computing.
 
|-
 
| [[programming/Perl|Perl]]
 
| Perl is an interpreted language useful for rapid code development and multi-purpose programming.
 
|-
 
| [[programming/Python|Python]]
 
| Python is an interpreted language useful for rapid code development and distributed computing.
 
|-
 
|[[programming/R|R]]
 
| R is a programming language and software environment for statistical analysis, graphics representation and reporting.
 
 
|-
 
|-
 
|}
 
|}

Latest revision as of 09:30, 16 November 2022


Welcome to Viper Wiki
Newbanner.png This area provides technical support to the users of Viper
  • Applications installed on Viper.
  • Libraries used with other programs.
  • Development to program your own codes, and run third-party code.
  • General items, like connecting to Viper, VPN and training materials.
Other Areas