Difference between revisions of "Applications/RStudio"
(Created page with "__TOC__ ==Application Details== * Description: RStudio is a free and open-source integrated development environment for R, a programming language for statistical computing a...") |
m (→Navigation) |
||
| (7 intermediate revisions by the same user not shown) | |||
| Line 14: | Line 14: | ||
R provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, …) and graphical techniques, and is highly extensible. The S language is often the vehicle of choice for research in statistical methodology, and R provides an Open Source route to participation in that activity. | R provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, …) and graphical techniques, and is highly extensible. The S language is often the vehicle of choice for research in statistical methodology, and R provides an Open Source route to participation in that activity. | ||
| − | Since this is an IDE for R it can only be used as an interactive session | + | * If you just wish to use R on the command line and for batch processing use the [[Applications/R|R module]]. |
| + | * If you wish to learn more about the [[Programming/R|R language]]. | ||
| + | |||
| + | Since this is an IDE for R it can only be used as an interactive session. | ||
===Interactive session=== | ===Interactive session=== | ||
| Line 31: | Line 34: | ||
</pre> | </pre> | ||
| − | == | + | ===Running RStudio=== |
| + | |||
| + | * RStudio allows parallel processing and on an '''exclusive''' interactive session Viper gives 28 processing cores | ||
| + | |||
| + | RStudio in an interactive session and running an R program may give the error: | ||
| + | |||
| + | <pre> | ||
| + | Warning message: | ||
| + | The character set is not UTF-8; please change your locale | ||
| + | </pre> | ||
| + | |||
| + | Although this error won't affect R you can silence this by typing the following on the console window within RStudio: | ||
| + | |||
| + | <pre> | ||
| + | > Sys.setlocale("LC_ALL") | ||
| + | </pre> | ||
| − | == | + | ==Next Steps== |
* [https://www.rstudio.com/ https://www.rstudio.com/] | * [https://www.rstudio.com/ https://www.rstudio.com/] | ||
* [https://www.r-project.org/ https://www.r-project.org/] | * [https://www.r-project.org/ https://www.r-project.org/] | ||
| − | { | + | {{Modulepagenav}} |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
Latest revision as of 10:58, 16 November 2022
Contents
Application Details
- Description: RStudio is a free and open-source integrated development environment for R, a programming language for statistical computing and graphics.
- Version: 3.0.1
- Modules: rstudio/3.0.1 relies on R/3.4.1 and QT
- Licence: Free, open-source
Usage Examples
R is a language and environment for statistical computing and graphics. It is a GNU project which is similar to the S language and environment which was developed at Bell Laboratories (formerly AT&T, now Lucent Technologies) by John Chambers and colleagues. R can be considered as a different implementation of S. There are some important differences, but much code written for S runs unaltered under R.
R provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, …) and graphical techniques, and is highly extensible. The S language is often the vehicle of choice for research in statistical methodology, and R provides an Open Source route to participation in that activity.
- If you just wish to use R on the command line and for batch processing use the R module.
- If you wish to learn more about the R language.
Since this is an IDE for R it can only be used as an interactive session.
Interactive session
[pysdlb@login] $ interactive salloc: Granted job allocation 933039 [pysdlb@login01 ~]$ module load rstudio/3.0.1 [pysdlb@login01 ~]$ rstudio libGL error: unable to load driver: swrast_dri.so libGL error: failed to load driver: swrast
Running RStudio
- RStudio allows parallel processing and on an exclusive interactive session Viper gives 28 processing cores
RStudio in an interactive session and running an R program may give the error:
Warning message: The character set is not UTF-8; please change your locale
Although this error won't affect R you can silence this by typing the following on the console window within RStudio:
> Sys.setlocale("LC_ALL")