Difference between revisions of "FurtherTopics/FurtherTopics"

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If you are new to Viper you may find our [[Main Page #Quickstart| Quickstart]] useful.
 
==Further Reading==
 
==Further Reading==
What is Viper?:  
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[https://hpc.wordpress.hull.ac.uk/ Viper Website]
[[General/What_is_Viper|What is Viper]]
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Research produced with the aid of Viper:
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[https://hpc.wordpress.hull.ac.uk/research-outputs/ Research]
  
 
Issues with Scaling:  
 
Issues with Scaling:  
 
[[Scaling|Scaling programs on HPC]]
 
[[Scaling|Scaling programs on HPC]]
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 +
[[FurtherTopics/Additional Information On Viper| Viper Specifications and Infrastructure]]
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==Linux Command Line==
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[[Quickstart/Linux Command Line| Basic Linux Command Line]]
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[[FurtherTopics/Linux Command Line Advanced| Additional Linux Command Line]]
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[[FurtherTopics/Command Line File Permissions| File Permissions]]
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==Interactive Sessions==
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[[Quickstart/Interactive| Interactive Sessions Quickstart]]
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[[FurtherTopics/FurtherInteractive|Further Information on Interactive Sessions]]
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==Slurm==
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[[Quickstart/Slurm| Slurm Quickstart]]
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[[FurtherTopics/Sinfo|Sinfo]]
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[https://slurm.schedmd.com/ Slurm Website]
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==Batch Jobs==
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[[Quickstart/Batch Jobs|Batch Jobs Quickstart]]
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[[FurtherTopics/Advanced Batch Jobs| Advanced Batch Jobs]]
  
 
==Visualisation Nodes==
 
==Visualisation Nodes==
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==Data Management==
 
==Data Management==
[[Training/Data_Backup|Data Backup]]
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[[Quickstart/Data Management| Data Management]]  
 
 
[[General/Netdrive|Windows Net Drive]]
 
  
[[Training/Transferring Data|Transferring Data]]
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[[FurtherTopics/WinSCP|Windows WinSCP]]
  
 
==Modules==
 
==Modules==
[[General/Modules|Modules]]
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{| class="wikitable mw-collapsible mw-collapsed "
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| style="width:25%; background: #f5a091;" | <Strong>Modules</Strong>
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| style="width:25%; background: #f5a091;" |
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|-
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|[[Quickstart/Using Modules|Using Modules]]
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| Learn how to use modules.
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|-
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|[[FurtherTopics/Further Modules|Further Module Information]]
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| More about modules and some extra commands.
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|-
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|[[Modules| Modules Available]]
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| Modules are available without the use of a special license.
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|-
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|[[Applications/Special Licenses| Modules requiring special licenses]]
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|Modules are available requiring the use of a special license.
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|-
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|[[Modules #Test Modules| Test Modules]]
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|Test Modules.
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|-
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|}
  
[[Applications| Applications installed on Viper]]
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==Programming==
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{| class="wikitable mw-collapsible mw-collapsed "
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| style="width:25%; background: #f5a091;" | <Strong>Programming</Strong>
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| style="width:25%; background: #f5a091;" |
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|-
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|[[Programming/Languages|Languages]]
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| Information on the languages available for use on Viper
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|-
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|[[Modules #Libraries| Libraries]]
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| Information on what programming libraries are available on Viper.
 +
|-
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|[[Programming/Style|Viper programming guidelines and style]]
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| Guidance on the readability of code.
 +
|-
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|[[Programming/OpenMPI| OpenMPI]]
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|A more detailed look at OpenMPI.
 +
|-
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|[[Programming/GitHub| GitHub]]
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| Information on using source control.
 +
|-
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|[http://hpc.wordpress.hull.ac.uk/support/research-software-engineering/ Research software engineering]
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| How code can be improved.
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|-
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|[[Training/Linux_-_vi_editor|Vi]]<br>[[Training/Linux - Nano editor| Nano]]
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| Text Editors on Linux.
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|-
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| [[Quickstart/Virtual Environments| Virtual Environment Quickstart]]
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| Get started using Miniconda.
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|-
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|[[Programming/Deep Learning| Deep Learning]]
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| Deep Learning.
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|-
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|}
  
[[Libraries| Libraries used with other programs]]
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==Compatibility==
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'''Visualisation Nodes'''
  
[[Applications/Special Licenses| Applications requiring special licenses]]
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X2Go enables remote access to Viper's Visualisation Nodes.
 +
[[Training/X2Go macOS| X2Go]]
  
==Programming==
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On newer MacOS XQuartz is required to use X2Go:
[[Programming|Development]] to program your own codes, run third party code
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[[Training/XQuartz| XQuartz]]
  
[[Programming/Style|Viper programming guidelines and style]]
 
  
[[Programming/GitHub|Use of Github for software control]]
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'''Connecting on Windows'''
  
[http://hpc.wordpress.hull.ac.uk/support/research-software-engineering/ Research software engineering]
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To connect to Viper on Windows an application that enables SSH connections is required, we recommend [[Quickstart/Connect #Connecting on a Windows PC| MobaXterm]]
  
[[Training/Linux_-_vi_editor|Linux vi editor]]
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==Support==
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[[General/UserDropin|User Drop-in Sessions]] are held every Wednesday from 09:30-10:30 on Teams.
  
[[Training/Linux - Nano editor|Linux nano editor]]
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There is a selection of [[Tutorial Videos/Tutorial Videos|Tutorial Videos]] to help get you started using Viper.
  
==Matlab==
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In the [https://hull.service-now.com/ Support Portal] you can find forms to request VPN access, report an issue with a job, request software install, and request a runtime extension.
[[Training/Matlab-Viper-plugin|Parallel computing in Matlab]]
 
  
[[Applications/Matlab|Matlab]]
 
  
==Jupyterhub==
 
[[Jupyterhub|Jupyterhub]]
 
  
==Compatibility==
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[[Main Page|Back Home]]
Some applications may require the installation of tools on mac.
 

Latest revision as of 15:21, 13 June 2024

If you are new to Viper you may find our Quickstart useful.

Further Reading

Viper Website

Research produced with the aid of Viper: Research

Issues with Scaling: Scaling programs on HPC

Viper Specifications and Infrastructure

Linux Command Line

Basic Linux Command Line

Additional Linux Command Line

File Permissions

Interactive Sessions

Interactive Sessions Quickstart

Further Information on Interactive Sessions

Slurm

Slurm Quickstart

Sinfo

Slurm Website

Batch Jobs

Batch Jobs Quickstart

Advanced Batch Jobs

Visualisation Nodes

Visualisation Nodes

Data Management

Data Management

Windows WinSCP

Modules

Modules
Using Modules Learn how to use modules.
Further Module Information More about modules and some extra commands.
Modules Available Modules are available without the use of a special license.
Modules requiring special licenses Modules are available requiring the use of a special license.
Test Modules Test Modules.

Programming

Programming
Languages Information on the languages available for use on Viper
Libraries Information on what programming libraries are available on Viper.
Viper programming guidelines and style Guidance on the readability of code.
OpenMPI A more detailed look at OpenMPI.
GitHub Information on using source control.
Research software engineering How code can be improved.
Vi
Nano
Text Editors on Linux.
Virtual Environment Quickstart Get started using Miniconda.
Deep Learning Deep Learning.

Compatibility

Visualisation Nodes

X2Go enables remote access to Viper's Visualisation Nodes. X2Go

On newer MacOS XQuartz is required to use X2Go: XQuartz


Connecting on Windows

To connect to Viper on Windows an application that enables SSH connections is required, we recommend MobaXterm

Support

User Drop-in Sessions are held every Wednesday from 09:30-10:30 on Teams.

There is a selection of Tutorial Videos to help get you started using Viper.

In the Support Portal you can find forms to request VPN access, report an issue with a job, request software install, and request a runtime extension.


Back Home